feat(arch): implement 'Code as Thought' architecture and formalize PSF Consensus Loop

system/skills/org-skill-org-mode.org

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-#+TITLE: SKILL: Org-Mode & AST Manipulation (The Grammar)
-#+ID: skill-org-mode
-#+STARTUP: content
-#+FILETAGS: :org-mode:ast:homoiconic:
-
-* Overview
-This skill defines the **Grammar of the Memex**. It is the set of rules that allow the `org-agent` to treat plain text as a structured, hierarchical database. In the [[file:personal-software-foundry.org][Personal Software Foundry (PSF)]], Org-mode is the **Homoiconic Memory**—it is both the documentation for humans and the abstract syntax tree (AST) for the agent.
-
-* The Org Mandate
-Following the PSF Mandates, all internal logic, plans, and skills MUST follow these structural rules:
-
-** 1. Everything is a Node
-Every concept or task is represented as an Org headline. 
-- **Headlines:** Hierarchical structure using asterisks (`*`, `**`, etc.).
-- **Metadata:** Contained within `:PROPERTIES:` drawers.
-- **Identity:** Every permanent node MUST have a globally unique `:ID:` for robust cross-referencing.
-
-** 2. Literate Programming
-Code is never isolated. It must be wrapped in `#+begin_src` blocks and accompanied by a narrative that explains its architectural intent. This ensures the "Why" is as persistent as the "How."
-
-** 3. Naming & Paths
-The Memex uses a strictly flat, link-heavy structure to prevent "folder silos":
-- **Daily Captures:** `~/memex/daily/YYYY-MM-DD.org`
-- **Permanent Knowledge:** `~/memex/notes/kebab-case-filename.org`
-- **Project Roots:** `~/memex/projects/project-name/`
-
-* Binary Integrity (org-attach)
-To prevent "broken path rot," all binary files (PDFs, images, data) are managed via the **Attachment Protocol**.
-1. **Host Node:** Binaries are always attached to a specific symbolic node (headline).
-2. **ID-Based Storage:** Files are stored in a directory named after the node's UUID.
-3. **Internal Linking:** Use `[[attachment:filename.ext]]` to ensure links remain valid even if the host file is moved.
-
-* Symbolic Implementation
-The following logic defines how the agent perceives and manipulates the Org AST.
-
-#+begin_src lisp
-(defun org-mode-parse-node (id)
-  "Retrieves the AST of a specific node by its ID."
-  (let ((notes-dir (expand-file-name "~/memex/notes/")))
-    (kernel-log "AST - Parsing node: ~a" id)
-    ;; Implementation of org-element-parse-buffer for the targeted node
-    (org-agent:run-shell-command (format nil "grep -r ':ID: ~a' ~a" id notes-dir))))
-#+end_src
-
-* See Also
-- [[file:personal-software-foundry.org][Personal Software Foundry Mandates]]
-- [[file:org-skill-scribe.org][Scribe Agent (The Archivist)]]

system/skills/org-skill-org-mode.org

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+/home/user/memex/notes/org-skill-org-mode.org