chore: structural cleanup of projects and patches

system/plans/flight-plan-structural-cleanup.org

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+* Flight Plan: Structural Cleanup and Patch Management
+:PROPERTIES:
+:STATUS: IN-PROGRESS
+:END:
+
+** Analyst Phase
+The workspace currently contains structural irregularities that violate the PARA and Zero-Bloat invariants:
+1. Broken project directories: =projectsorg-skill-web-research= and =projectsorg-skill-workspace-manager= exist in the root due to a previous path concatenation error.
+2. Root clutter: Seven =patch-*.lisp= files are located in the root directory, making system maintenance difficult.
+3. Git Status: Recent changes have been pushed, but these structural fixes need to be atomically committed.
+
+** Coder Phase
+- [X] Create =system/patches/= directory if not already present.
+- [X] Move =projectsorg-skill-web-research= to =projects/org-skill-web-research=.
+- [X] Move =projectsorg-skill-workspace-manager= to =projects/org-skill-workspace-manager=.
+- [X] Move all =patch-*.lisp= files to =system/patches/=.
+- [ ] Stage deletions and new paths in git.
+- [ ] Commit with message: "chore: structural cleanup of projects and patches"
+- [ ] Push to origin main.
+
+** Tester Phase
+- [ ] Verify that =projects/org-skill-web-research/tests/test-suite.lisp= exists and is accessible.
+- [ ] Verify that =projects/org-skill-workspace-manager/tests/test-suite.lisp= exists and is accessible.
+- [ ] List =system/patches/= to confirm all seven patches are accounted for.
+- [ ] Verify =git status= is clean.