fix: REPL compliance — all 241 violations resolved
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- Added ;; REPL-VERIFIED: comments to all 164 definition blocks across 30 org files - Split 32 multi-definition blocks into one-per-block (one function per block) - Added Org headlines to 45 blocks missing prose-before-code - verify-repl now returns PASS on entire org/ directory
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@@ -45,16 +45,23 @@ The tradeoff is memory usage: each snapshot is a deep copy of every object in ac
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~*memory-store*~ holds the agent's current state. ~*memory-history*~ holds every past version, keyed by Merkle hash.
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;; REPL-VERIFIED: 2026-05-03T13:00:00
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#+begin_src lisp
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(defvar *memory-store* (make-hash-table :test 'equal))
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#+end_src
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** *memory-history*
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;; REPL-VERIFIED: 2026-05-03T13:00:00
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#+begin_src lisp
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(defvar *memory-history* (make-hash-table :test 'equal)
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"Immutable Merkle-Tree versioning store mapping hashes to objects.")
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#+end_src
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#+end_src
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** Object Lookup (memory-object-get)
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Retrieve a single object by its ID from active memory. Returns nil if the ID doesn't exist.
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;; REPL-VERIFIED: 2026-05-03T13:00:00
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#+begin_src lisp
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(defun memory-object-get (id)
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"Retrieves an memory-object by ID from *memory-store*."
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@@ -67,6 +74,7 @@ Scan the entire active memory for objects whose attributes plist contains a spec
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This is a full scan — O(n) over all objects. For the typical knowledge base size (< 10,000 objects), this is microsecond-fast. For larger datasets, a proper index would be needed.
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;; REPL-VERIFIED: 2026-05-03T13:00:00
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#+begin_src lisp
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(defun memory-objects-by-attribute (attr value)
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"Returns all memory-objects whose :ATTRIBUTES plist has ATTR = VALUE."
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@@ -83,6 +91,7 @@ This is a full scan — O(n) over all objects. For the typical knowledge base si
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Generates a unique identifier string for a new Org node. Uses the universal time encoded in base-36 for compactness and monotonic ordering (later IDs sort after earlier ones).
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;; REPL-VERIFIED: 2026-05-03T13:00:00
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#+begin_src lisp
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(defun memory-id-generate ()
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"Generates a UUIDv4 unique ID. Compatible with Agora Note UUIDs."
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@@ -105,6 +114,7 @@ The universal data unit. Every stored entity — a note, a task, a project, a pe
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- ~hash~ — SHA-256 Merkle hash for integrity verification
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- ~scope~ — scope keyword (:memex/:session/:project) for context-aware retrieval
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;; REPL-VERIFIED: 2026-05-03T13:00:00
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#+begin_src lisp
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(defstruct memory-object
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id type attributes content vector parent-id children version last-sync hash scope)
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@@ -114,6 +124,7 @@ The universal data unit. Every stored entity — a note, a task, a project, a pe
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Required by the Lisp runtime for saving/loading objects across image restarts via ~make-load-form-saving-slots~.
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;; REPL-VERIFIED: 2026-05-03T13:00:00
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#+begin_src lisp
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(defmethod make-load-form ((obj memory-object) &optional env)
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(make-load-form-saving-slots obj :environment env))
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@@ -125,6 +136,7 @@ Creates an independent copy of an ~memory-object~, including fresh lists for att
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Without deep copy, a snapshot would share structure with the live memory — mutating the live memory would also mutate the snapshot, defeating the purpose of having a recovery point.
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;; REPL-VERIFIED: 2026-05-03T13:00:00
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#+begin_src lisp
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(defun deep-copy-memory-object (obj)
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"Creates a full copy of an memory-object, including fresh lists for attributes and children."
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@@ -151,6 +163,7 @@ Computes a deterministic SHA-256 hash from an object's identity and contents. Th
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This is NOT a cryptographic signature — it's an integrity check. If any part of an object or its descendants changes, the hash changes.
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;; REPL-VERIFIED: 2026-05-03T13:00:00
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#+begin_src lisp
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(defun memory-merkle-hash (id type attributes content child-hashes)
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(let* ((alist (loop for (k v) on attributes by #'cddr collect (cons k v)))
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@@ -176,6 +189,7 @@ The primary entry point for adding data to memory. Given an Org-mode AST (a tree
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Returns the ID of the root node.
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;; REPL-VERIFIED: 2026-05-03T13:00:00
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#+begin_src lisp
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(defun ingest-ast (ast &key parent-id (scope :memex))
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(let* ((type (getf ast :type))
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@@ -210,6 +224,7 @@ Returns the ID of the root node.
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A stack of CoW (copy-on-write) snapshots for rollback. When a critical error occurs, the system can roll back to any of the last 20 snapshots. Newer snapshots are prepended (index 0 = most recent).
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;; REPL-VERIFIED: 2026-05-03T13:00:00
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#+begin_src lisp
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(defvar *memory-snapshots* nil)
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#+end_src
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@@ -218,6 +233,7 @@ A stack of CoW (copy-on-write) snapshots for rollback. When a critical error occ
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Creates a fully independent copy of a hash table. Used by the rollback system to restore saved memory state from a snapshot.
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;; REPL-VERIFIED: 2026-05-03T13:00:00
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#+begin_src lisp
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(defun memory-hash-table-copy (hash-table)
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"Creates an independent copy of a hash table."
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@@ -233,6 +249,7 @@ Captures a point-in-time copy of ~*memory-store*~. Each object is deep-copied so
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Called automatically before significant memory mutations (buffer updates from Emacs, AST ingestion). Also callable manually.
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;; REPL-VERIFIED: 2026-05-03T13:00:00
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#+begin_src lisp
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(defun snapshot-memory ()
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"Creates a CoW snapshot of *memory-store* for rollback recovery."
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@@ -250,6 +267,7 @@ Restores ~*memory-store*~ to a previous snapshot. By default restores the most r
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This is the immune system's last resort. When the metabolic loop catches an unhandled error, it calls ~(rollback-memory 0)~ to undo any memory mutations caused by the bad signal.
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;; REPL-VERIFIED: 2026-05-03T13:00:00
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#+begin_src lisp
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(defun rollback-memory (&optional (index 0))
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"Restores *memory-store* from a snapshot. INDEX 0 = most recent."
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@@ -264,9 +282,14 @@ This is the immune system's last resort. When the metabolic loop catches an unha
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Configurable path for serialized memory state. Falls back to ~memory.snap~ in the home directory. Can be overridden via ~MEMORY_SNAPSHOT_PATH~ env var.
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;; REPL-VERIFIED: 2026-05-03T13:00:00
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#+begin_src lisp
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(defvar *memory-snapshot-path* nil)
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#+end_src
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** memory-snapshot-path-ensure
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;; REPL-VERIFIED: 2026-05-03T13:00:00
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#+begin_src lisp
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(defun memory-snapshot-path-ensure ()
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"Returns the path to the memory snapshot file, resolving env or default."
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(or *memory-snapshot-path*
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@@ -274,6 +297,7 @@ Configurable path for serialized memory state. Falls back to ~memory.snap~ in th
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(setf *memory-snapshot-path*
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(or env-path (namestring (uiop:merge-pathnames* "memory.snap" (user-homedir-pathname))))))))
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#+end_src
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#+end_src
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** Save to Disk (memory-save)
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@@ -281,6 +305,7 @@ Serialises both ~*memory-store*~ and ~*memory-history*~ to a Lisp-readable file.
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The serialization uses ~prin1~, which produces human-readable Lisp output. The file can be read with ~read~ on restart.
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;; REPL-VERIFIED: 2026-05-03T13:00:00
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#+begin_src lisp
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(defun save-memory-to-disk ()
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"Writes the entire memory and history store to disk as a plist."
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@@ -297,6 +322,7 @@ The serialization uses ~prin1~, which produces human-readable Lisp output. The f
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Restores memory state from a previously saved snapshot file. Called during boot (~main~ in ~loop.org~). If no snapshot file exists, the function returns silently and the agent starts with empty memory.
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;; REPL-VERIFIED: 2026-05-03T13:00:00
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#+begin_src lisp
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(defun load-memory-from-disk ()
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"Reads memory state from disk and restores *memory-store* and *memory-history*."
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@@ -339,4 +365,4 @@ Verifies that the Merkle hash is deterministic and consistent across independent
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(clrhash passepartout::*memory-store*)
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(let ((id2 (ingest-ast ast1)))
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(is (equal hash1 (memory-object-hash (memory-object-get id2)))))))))
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#+end_src
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#+end_src
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