- loop.org: Explain metabolic pipeline, error recovery, heartbeat
- reason.org: Document dual-engine architecture (probabilistic + deterministic)
- act.org: Detail actuation, actuator pattern, feedback loop
- perceive.org: Explain signal normalization, async vs sync processing
- manifest.org: Add ASDF system design, boundary contract
Each function now has its own code block with detailed docstrings explaining:
- What the function does
- Why it was designed that way
- How it fits into the larger system
- Parameter descriptions
- Return values
