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Code Issues 15 Pull Requests 1 Actions Packages Projects Releases Wiki Activity
507 Commits 4 Branches 14 Tags
d803889c01bab438fc2e8ce0fd3c8ae5d1131fd4
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51 Commits

Author SHA1 Message Date
Amr Gharbeia
41de20d3f1 v0.2.1: polish, deploy, CI, and literate refactor
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- Secret Exposure Gate + Privacy Filter (Bouncer)
- Shell actuator safety harness (timeout, blocked patterns)
- REPL-first enforcement (lisp validation gate, system-prompt-augment)
- Engineering Standards lifecycle (two-track Org-first + REPL-first)
- Literate Programming discipline (one function per block, reflect-back)
- AGENTS.md: thin routing layer, skills are authoritative
- SKILLS_DIR removed, ~/notes fallback eliminated
- opencortex.sh: multi-distro (Debian+Fedora), configure, install service, backup, restore, help
- infrastructure/opencortex.service (systemd user unit)
- Docker: updated to debian:trixie, fixed build context
- GitHub CI: lint + test workflows fixed, trigger on tags only
- Gitea CI: deploy workflow paths fixed
- README: one-line curl install, badges
- USER_MANUAL: Deployment section (bare metal, Docker, backup)
- .gitignore: skills/*.lisp and tests/*.lisp as generated artifacts
- Prose/block refactor across all 35 org files
- Test suite Tier 1: 43/45 pass (env-dependent failures isolated)
 2026-05-02 17:04:33 -04:00
Amr Gharbeia
1eb8a3db92 refactor(skills): use %%SKILLS_DIR%% placeholder for portable tangling 
- Updated 22 skill org files to use %%SKILLS_DIR%% placeholder
- Modified opencortex.sh setup to replace placeholder with XDG path
- Modified doctor_repair to handle placeholder replacement
- Removed hardcoded absolute path
 2026-04-30 11:14:31 -04:00
Amr Gharbeia
21c792b019 refactor(skills): absolute XDG paths for tangling 
- Updated all 23 skill org files to use absolute path
- Tangle now outputs directly to ~/.local/share/opencortex/skills/
- Removed  env var (org-babel doesn't expand it)
 2026-04-30 11:09:46 -04:00
Amr Gharbeia
dd8bb6e3c8 refactor(skills): use XDG paths for tangle destinations 
- Updated all 22 skill org files to use $OC_DATA_DIR/skills/ paths
- Removed manually created .lisp file (tangling now targets XDG)
- Files will now tangle to ~/.local/share/opencortex/skills/
 2026-04-30 11:09:21 -04:00
Amr Gharbeia
6a6f4479ac feat(core): Skills consolidation and v0.2.0 TUI integration 
- NEW: org-skill-utils-lisp (consolidated from org-skill-lisp-utils)
  * 3-phase validation: structural, syntactic, semantic
  * Sandboxed eval, AST extraction/injection/wrapping
  * Format, list-definitions utilities

- NEW: org-skill-utils-org (consolidated from org-skill-emacs-edit)
  * Read/update/delete org headlines
  * Property management, TODO state handling
  * ID-link and internal link support

- DELETE: org-skill-lisp-utils (merged into utils-lisp)
- DELETE: org-skill-emacs-edit (merged into utils-org)
- RENAME: run-all-tests.lisp -> run-tests.lisp

- HARDEN: Skill loader with improved lisp keyword handling
- FIX: Package jailing issues with def-cognitive-tool macro conflicts
- ADD: Setup wizard (opencortex setup) and doctor (opencortex doctor)
- ADD: TUI client with Croatoan for native terminal rendering

- REMOVE: Dynamic loading from opencortex.asd (use :force t instead)
- CLEANUP: Test file consolidation (removed duplicate test suites)

Co-authored-by: Agent <agent@memex>
 2026-04-30 10:52:20 -04:00
Amr Gharbeia
a616c509ca fix(chaos): standardize test tangle paths to ../tests/ for deployment 2026-04-28 19:42:45 -04:00
Amr Gharbeia
829bd7b7aa fix(skills): finalize reconstructions for diagnostics and llm-gateway 2026-04-28 19:18:49 -04:00
Amr Gharbeia
8ad7443d3f fix(skills): finalize reconstructions for diagnostics and llm-gateway 2026-04-28 19:18:11 -04:00
Amr Gharbeia
def2774c8f fix(chaos): hard-inserted clean relative tangle headers in all core files 2026-04-28 19:04:34 -04:00
Amr Gharbeia
96fe9cdd94 fix(chaos): finalized system-wide reconstruction to resolve FiveAM and EOF failures 2026-04-28 18:49:27 -04:00
Amr Gharbeia
f3858b0330 fix(skills): reconstruct multiple broken skills to resolve syntax errors 2026-04-28 18:46:40 -04:00
Amr Gharbeia
357efbdb59 fix(chaos): finalized absolute tangle paths via concat and INSTALL_DIR 2026-04-28 18:22:49 -04:00
Amr Gharbeia
d55384fb65 fix(chaos): use standard getenv for absolute tangle paths 2026-04-28 17:57:57 -04:00
Amr Gharbeia
d787981d0d fix(chaos): force absolute tangle paths via concat to eliminate path resolution ambiguity 2026-04-28 17:57:31 -04:00
Amr Gharbeia
b7f6eb68e9 fix(chaos): stabilize tangle paths to absolute targets via concat for reliable bootstrap 2026-04-28 17:56:48 -04:00
Amr Gharbeia
fd5513057e fix(chaos): switch to definitive absolute paths via expand-file-name for reliable tangling 2026-04-28 17:55:58 -04:00
Amr Gharbeia
d6a7e83de4 fix(chaos): use robust (or INSTALL_DIR buffer-dir) for tangle paths 2026-04-28 17:55:08 -04:00
Amr Gharbeia
635db05d17 fix(chaos): standardize tangle paths to robust (identity (getenv ...)) 2026-04-28 17:54:12 -04:00
Amr Gharbeia
a5538bf9d8 fix(chaos): standardize tangle paths to uiop:getenv across all org files 2026-04-28 17:51:44 -04:00
Amr Gharbeia
10206860db fix(test): use dynamic symbol lookup for jailed llm-gateway test 2026-04-28 17:38:23 -04:00
Amr Gharbeia
609669b304 fix(chaos): resolve package and symbol issues in Tier 2 tests 2026-04-28 17:36:44 -04:00
Amr Gharbeia
589ff1cb8d fix(test): use standard uiop:getenv for environment modification 2026-04-28 17:35:55 -04:00
Amr Gharbeia
e31222d6e3 feat(chaos): implement Tier 2 Integration Chaos for Memory, Networking, and LLM Gateway 2026-04-28 17:32:15 -04:00
Amr Gharbeia
80e327dd20 fix(v0.2.0): resolve macro conflicts, sync load order, and fix skill packaging 
- Standardized def-cognitive-tool to 5-argument signature.
- Consolidated *cognitive-tools* as a hash table in package.lisp.
- Removed skills from opencortex.asd to enforce dynamic Skill Engine loading.
- Added missing (in-package :opencortex) to various skill files.
- Fixed let/let* sequential binding issues in emacs-edit and self-edit.
- Updated opencortex.sh to initialize skills before running doctor.
- Fixed uiop:user-homedir-pathname usage in config-manager.
 2026-04-28 10:46:24 -04:00
Amr Gharbeia
3dddfe3e3d chore: checkpoint broken state before fixing macro conflict 2026-04-28 10:33:51 -04:00
Amr Gharbeia
2e8e79a193 fix(v0.2.0): finalize structural integrity and clean boot
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- Fixed memory.org source blocks to ensure persistence functions are tangled.
- Improved extract-tangle-target to handle complex Elisp expressions.
- Corrected opencortex.sh initialization paths to prevent setup loops.
- Reordered variable definitions in policy and standards skills to eliminate forward-reference warnings.
 2026-04-27 18:54:18 -04:00
Amr Gharbeia
f940861921 build: dynamically tangle to INSTALL_DIR without copying .org files
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- Updated all 150+ :tangle headers across harness/ and skills/ to use elisp (expand-file-name) to target INSTALL_DIR dynamically.
- Cleaned up environment/ directory depth by moving memory-image.lisp to state/.
- Moved test scripts to tests/ and deleted redundant chat scripts.
 2026-04-27 12:51:29 -04:00
Amr Gharbeia
664ba8243d refactor: Flatten directory structure library->harness, library/gen->skills 2026-04-27 08:41:26 -04:00
Amr Gharbeia
dfe318425f Add v0.2.0 features: vector search + tool permissions 
- Local vector search: Ollama embeddings + semantic search
  - get-embedding with caching
  - cosine-similarity computation
  - semantic-search cognitive tool
  - :semantic-search tool for LLM queries

- Tool permission tiers: security gating for cognitive tools
  - Three tiers: :allow, :deny, :ask
  - Gate in execute-tool-action before tool runs
  - Defaults: :deny for shell/delete-file, :ask for eval/write-file
  - :tool-permissions cognitive tool for management

- Embedding provider support: Ollama AND llama.cpp
  - EMBEDDING_PROVIDER env var
  - EMBEDDING_MODEL env var
  - LLAMA_HOST for llama.cpp server

- .env.example: Add embedding config variables
- Fix parse-message in communication.lisp

- Update ASDF: add test files, tool-permissions skill

All 60 tests pass (6 suites x 100%)
 2026-04-23 13:43:50 -04:00
Amr Gharbeia
6c333af7aa ARCH: Finalize semantic reorganization, skill jailing, and unified CLI
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2026-04-22 11:38:13 -04:00
Amr Gharbeia
cab0e5a459 RELEASE: OpenCortex v0.1.0 (The Autonomous Foundation)
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- Audited Reactive Signal Pipeline.
- Finalized Unified Envelope & Provider-Agnosticism.
- Completed workspace cleanup and documentation.
- Hardened installer for VM/Docker deployment.
 2026-04-20 19:05:37 -04:00
Amr Gharbeia
c70f182888 FEAT: Stabilize Unified Envelope Architecture & TUI UX
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- Fixed background boot crash via --non-interactive flag.
- Implemented robust protocol sanitization (stripped raw streams).
- Refined TUI formatting to display human-readable tool results.
- Fixed opencortex.sh variable shadowing and connection logic.
- Resolved :target field schema validation errors.
 2026-04-20 18:19:54 -04:00
Amr Gharbeia
5ad02f6f2e fix(protocol): Make validator case-insensitive and normalize actuation keywords
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2026-04-19 19:44:26 -04:00
Amr Gharbeia
e1ce366130 fix(tui): Definitive syntax repair and case-insensitive handling
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2026-04-19 18:37:15 -04:00
Amr Gharbeia
63e7e9ce32 fix(gateway): Case-insensitive key lookup in get-nested (OpenRouter response fix)
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2026-04-19 17:35:25 -04:00
Amr Gharbeia
ec1f4af623 fix(gateway): Repair malformed handler-case syntax in LLM Gateway
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2026-04-19 17:32:53 -04:00
Amr Gharbeia
0f49356886 fix(gateway): Harden response parsing and enable neural debugging (OpenRouter fix)
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2026-04-19 17:31:00 -04:00
Amr Gharbeia
3374d27e75 fix(reason): Initialize neural provider cascade (resolves Neural-Dead kernel)
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2026-04-19 17:22:30 -04:00
Amr Gharbeia
849c078c37 REFAC: Global rename of org-agent to opencortex 2026-04-14 12:10:11 -04:00
Amr Gharbeia
da0919149e REFAC: Shift terminology to Autonomy and harden CLI via socat 2026-04-14 09:37:40 -04:00
Amr Gharbeia
19fb888434 ARCH: Finalize Microkernel Decoupling - Move behavioral skills to dynamic user-space 2026-04-13 16:11:09 -04:00
Amr Gharbeia
5f86bcd8dc ALIGN: Rename Protocol to Communication and unify terminology 2026-04-13 14:17:28 -04:00
Amr Gharbeia
3e68cc11af REFACTOR: Explanatory Core Architecture & Terminology Alignment 2026-04-13 09:03:42 -04:00
Amr Gharbeia
3f8c37712c docs: global terminology update from kernel/core to harness 2026-04-12 18:28:11 -04:00
Amr Gharbeia
9fcf45d918 FEAT: Implement 5-Vector Bouncer Matrix and foundational refactor 2026-04-11 16:36:06 -04:00
Amr Gharbeia
975a11da79 CHORE: Prepare for Signal Gateway implementation 2026-04-11 15:48:22 -04:00
Amr Gharbeia
9497a5955c FEAT: Verify all LLM providers and fix Gemini parsing 2026-04-11 15:17:34 -04:00
Amr Gharbeia
393c86c7cf FIX: Repair dangling dependencies in the skill graph 2026-04-09 21:10:52 -04:00
Amr Gharbeia
640bd92a0e REFAC: Consolidate Auth skills into secure Credentials Vault 2026-04-09 20:36:24 -04:00
Amr Gharbeia
fed7c04e25 ALIGN: LLM Gateway with PSF phases and QA standards 2026-04-09 20:34:16 -04:00