- Standardized def-cognitive-tool to 5-argument signature.
- Consolidated *cognitive-tools* as a hash table in package.lisp.
- Removed skills from opencortex.asd to enforce dynamic Skill Engine loading.
- Added missing (in-package :opencortex) to various skill files.
- Fixed let/let* sequential binding issues in emacs-edit and self-edit.
- Updated opencortex.sh to initialize skills before running doctor.
- Fixed uiop:user-homedir-pathname usage in config-manager.
- Finalized Reflection Loop: Injected deterministic rejection traces back into LLM prompts.
- Hardened Actuators: Added path-traversal guards and enforced Merkle snapshots on AST edits.
- Refactored Lisp Utils: Merged validator/repair into a unified utility skill with whitelist Ast-walking.
- Fixed Build: Resolved all 30+ syntax, scoping, and package visibility errors.
- Verified: Full pass (100%) on all 5 core test suites.
- Hardened actuators: Fixed path-traversal vulnerabilities in file I/O tools and blocked .org files from regex replacements to force AST usage. Enforced Merkle snapshots on AST edits.
- Implemented Reflection Loops: Injected rejection traces from deterministic gates back into the LLM context to enable autonomous self-correction.
- Finalized tool permission tiers (ask/allow/deny) with proper LLM prompt filtering.
- Updated all 150+ :tangle headers across harness/ and skills/ to use elisp (expand-file-name) to target INSTALL_DIR dynamically.
- Cleaned up environment/ directory depth by moving memory-image.lisp to state/.
- Moved test scripts to tests/ and deleted redundant chat scripts.
- Fix critical paren balance issues across harness/skills.org, act.org,
loop.org, memory.org, and skills/self-edit|emacs-edit.org
- Add :reload-skill cognitive tool for hot-reloading without restart
- Add :generate-embeddings tool and self-edit hot-reload infrastructure
- Wire all new skills (self-edit, emacs-edit, lisp-utils) into main ASDF
- Regenerate all .lisp tangled files via emacs --batch org-babel-tangle
- Add :opencortex/tests ASDF system with 14 test suites
- Fix test files to compile cleanly (self-edit-tests symbol vis, etc.)
- Pure Lisp implementation (no Emacs subprocess)
- Read org files via ingest-ast
- Write back preserving structure (#+begin_src blocks)
- Add headlines with auto-generated IDs
- Set properties on headlines
- Set TODO states (TODO → DONE)
- Cognitive tools: :org-read, :org-write, :org-add-headline, :org-set-property, :org-set-todo
This enables self-editing on org files without breaking tangling.
